You are currently not logged in
phosphoproteomics, Identification of proteins, Quantitative proteomics, enzyme activity

Preserve phosphorylation states

An ability to determine phosphorylation states that reflect the in vivo status as closely as possible is crucial to understanding the role of phosphoproteins in diseases such as cancer, neurodegeneration and atherosclerosis, in disease prognosis and in determining the action of a potential therapeutic. However, phosphorylation states are highly sensitive to disturbances and can change rapidly due to kinase and phosphatase activity that may continue after sampling.

Maintain phosphorylation states post-sampling

An evaluation of heat stabilization technology compared to conventional snap freezing, demonstrated that, during 30min at room temperature, phosphorylation states continued to change in snap-frozen samples of hippocampal lysates.

Phosphorylation states remain constant in heat-stabilized samples

pERK1, pERK, phosphoproteins, tissue biopsy, PTM, phosphatase
pJNK1, pJNK, phosphoproteins, phosphorylase, signalling pathways

Histograms represent average values for each group of samples relative to 100% for snap-frozen samples at 0 min RT (white); 30 min RT (grey); heat-stabilized samples at 0 min RT (black); 30 min RT (stripes). Statistical significance determined by unpaired Student’s t-test.

Results courtesy of Ahmed et al. Preserving protein profiles in tissue samples: Differing outcomes with and without heat stabilization. Journal of Neuroscience Methods, 2011 March

Permanently inactivate kinase and phosphatase activity without the use of inhibitors

Heat stabilization abolished 99.6% of kinase activity

Enlarge

Only three out of 144 peptides produced measurable fluorescence in heat-stabilized samples.
Of the remaining 126 peptides (not shown), 73 peptide substrates produced measurable fluorescence in snap-frozen homogenates. Based on the sum of fluorescence measured from these 91 peptides, it is estimated that heat stabilization abolished 99.6% kinase activity in these samples.

Results courtesy of Harvard Medical School (Thermal stabilization of tissues and the preservation of protein phosphorylation states for two-dimensional gel electrophoresis. Smejkal et al., Electrophoresis 2011, Volume 32, pages 2206–2215).

Heat stabilization permanently inactivates phosphatases

phosphorylation, phosphatase, inhibitiors, cell signalling, phosphopeptide

Phosphatase activity measured using SensoLyte pNPP phosphatase kit (Anaspec).

Heat-stabilized mouse brain cortex samples show a significant lower level of phosphatase activity compared to snap frozen samples with and without inhibitors. Phosphatase activity is equivalent to background levels (Svensson et al. Heat stabilization of the Tissue Proteome: A New Technology for Improved Proteomics. J Proteome Res. 2009)

MORE INFORMATION

BROCHURE

Stabilizor system

POSTER

Changes in phosphorylation states post-mortem may distort in vivo proteomic profiles

POSTER

Impact of tissue stabilization technology on in vivo shotgun phosphoproteome analysis

Login
E-mail:
Password:
Keep me logged in

If you do not have a Denator website account yet:
request one here.

If you forgot your password:
request a new one.